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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907875.1_cds_XP_016457973.1_51644
CDS Infomation

[gene=LOC107781740] [db_xref=GeneID:107781740] [protein=VAN3-binding protein-like isoform X2] [protein_id=XP_016457973.1] [location=complement(join(131226..131440,131647..131704,131917..131966,132104..132319,132510..132948,133895..134005,134753..135076))] [gbkey=CDS]
Sequence

ATGGACCAAGTTCAGCCAATGTACCGGCCACCACCACCGGAGACACCCAAAGAACCCATG
GAATTTCTGTCTCGTTCTTGGAGTGTCTCTGCTTTTGAAGTCTCAAAAGCTTTAGCTCCT
TCTCAAGTTTTAACAAAGTCCTTAATCACTGGTACTACCCCTTCTTCTTATGGCCCTCTT
TTTAATGGGAGTAGTGGTAGTGGGACTATACCAGAAGATATTGCTGGCGAGTTGGATGAA
TCAACTACTGTTTCTGGCAACCCTTTTTCTTTTGCTTCTTCTGAAACTTCTCAGCTTGTT
ATGGAACGCATTATGTCTGTTTCCGATGTTTCACCACGGACATCAGGGCGACTATCTCAC
AGCAGTGGACCTTTAAATGGTGGTTCTCTTACAGACAGTCCCCCTGTTTCTCCTTCCGAA
ATGGATGATTCTAAGTACTGCCGTTTGAACAACATACCAGTCAATAATCAGTACCGGAGC
AGCGCTACTGCTGCAGGCACATCCTTGACCGGTGGCGGCGGTGGCGGTGGGAAAACTGTT
GGTAGGTGGTTGAAGGATAGGAGAGAGAAGAAGAAAGAGGACGCGAGGGCACATAATGCG
CAGCTCCATGCTGCTGTTTCAGTTGCAGGAGTTGCTGCTGCTGTTGCTGCTATTGCTGCT
GCCACTGCAGCCTCGTCCGGTAGCAGAAAGGATGAGCAGATGGCAAAAACTGATATGGCT
GTGGCCTCTGCTGCAACATTGGTGGCAGCACAGTGTGTTGAAGCTGCTGAGGCTATGGGA
GCTGAGCGTGAACATCTTGCATCAGTGGTTAGTTCTGCTGTGAATGTTCGATCAGCTGGG
GATATTATGACTTTAACTGCAGCTGCAGCAACTGCTCTACGTGGTGCGGCTACGCTAAAA
GCTAGAACATTGAAGGAAGTATGGAACATAGCAGCAGTAATTCCTGTTGAGAAAGGGATG
GCAAGTGGCAACGGTGGTGGTAGCAATGGTAGTTCAAGTGGCGAGCTCATCCCCGAAGAG
AATTTTCTTGGAATTTGCAGTAGGGAATTGCTTGCAAGAGGCGGTGAGCTCCTAAAGCGT
ACACGCAAAGGTGACCTTCACTGGAAGATAGTGTCTGTGTACATAAATAGGATGGGTCAG
GTGATGCTGAAAATGAAGAGCAGGCACGTTGCTGGGACCATCACAAAAAAGAAAAAGAAT
GTGGTGCTGGAAGTCATGAAAGATATTCCGGCTTGGCCGGGGCGCCACTTGCTGCCTGGC
AGTGACAACTTCCGGTATTTCGCATTGAAGACTGTTCTACGAGGGGTCGTGGAATTTGAG
TGCAGAGACCAGAGAGAGTATGATCTATGGACTCAAGGTGTTTCCAGGCTGCTAACTATT
GCTGCAGAAAGAAATAGTAGACATAGATTTTGA

Peptide Sequence

PEP ID

XP_016457973.1
PEP Infomation

PREDICTED: VAN3-binding protein-like isoform X2 [Nicotiana tabacum]
Sequence

MDQVQPMYRPPPPETPKEPMEFLSRSWSVSAFEVSKALAPSQVLTKSLITGTTPSSYGPL
FNGSSGSGTIPEDIAGELDESTTVSGNPFSFASSETSQLVMERIMSVSDVSPRTSGRLSH
SSGPLNGGSLTDSPPVSPSEMDDSKYCRLNNIPVNNQYRSSATAAGTSLTGGGGGGGKTV
GRWLKDRREKKKEDARAHNAQLHAAVSVAGVAAAVAAIAAATAASSGSRKDEQMAKTDMA
VASAATLVAAQCVEAAEAMGAEREHLASVVSSAVNVRSAGDIMTLTAAAATALRGAATLK
ARTLKEVWNIAAVIPVEKGMASGNGGGSNGSSSGELIPEENFLGICSRELLARGGELLKR
TRKGDLHWKIVSVYINRMGQVMLKMKSRHVAGTITKKKKNVVLEVMKDIPAWPGRHLLPG
SDNFRYFALKTVLRGVVEFECRDQREYDLWTQGVSRLLTIAAERNSRHRF

Transcript Sequence

Gene sequence data has not been registered.